MIMIC3db R Package
MIMIC3db provides a tightly bound set of routines to reference a SQLite version of the MIMIC-III v1.4 database on a local network using base access routines from the RSQLite R package. The GitHub site for the package also conatins SQL scripts to build and load a local SQLite database to the specifications of the access routines in the package.
The package GitHub site is https://github.com/hdshea/MIMIC3db.
You can install MIMIC3db from GitHub in R with:
#> install.packages("devtools")
devtools::install_github("hdshea/MIMIC3db")
MIMIC4db R Package
MIMIC4db provides a tightly bound set of routines to reference the Google BigQuery version of the MIMIC-IV v1.0 database using base access routines from the DBI R package with an appropriate bigrquery DBIConnection.
The package GitHub site is https://github.com/hdshea/MIMIC4db.
You can install MIMIC4db from GitHub in R with:
#> install.packages("devtools")
devtools::install_github("hdshea/MIMIC4db")
OWID Data Exploration
The Our World in Data organization collects and creatively displays some very interesting datasets. In this page - developed in R Markdown - I show some graphic examples of a few of their datasets.
R Shiny examples
Some rudimentary examples of Shiny apps from audited edX R Shiny for Everyone course:
Property Tracker Shinyapps Link
GitHub: https://github.com/hdshea/RShiny/tree/main/Week%203
National Parks Biodiversity Shinyapps Link
GitHub: https://github.com/hdshea/RShiny/tree/main/Week%204
NLP studies
Some R code working through the Text Mining with R: A Tidy Approach book examples and meanderings:
GitHub: https://github.com/hdshea/Text-Mining-Research